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病毒基因组
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基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV11588042 hCoV-19/tiger/USA/IL-21-40753/2021 EPI_ISL_8689511 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-09-24 Panthera tigris tigris 4939 2022-01-13 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID University of Illinois Veterinary Diagnostic Laboratory Leyi Wang University of Illinois Veterinary Diagnostic Laboratory 4939 100.00
OEAV12052225 hCoV-19/lion/USA/IN-21-039574-001/2021 EPI_ISL_9046670 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-18 Panthera leo 29827 2022-01-25 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID IDEXX Reference Laboratories Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29827 100.00
OEAV12052226 hCoV-19/lion/USA/LA-22-000856-007/2021 EPI_ISL_9046672 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-30 Panthera leo 29804 2022-01-25 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Louisiana Animal Disease Diagnostic Laboratory Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29804 100.00
OEAV12052227 hCoV-19/lion/USA/LA-22-000856-008/2021 EPI_ISL_9046673 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-30 Panthera leo 29791 2022-01-25 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Louisiana Animal Disease Diagnostic Laboratory Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29791 100.00
OEAV12052228 hCoV-19/lion/USA/UT-21-033479-005/2021 EPI_ISL_9046671 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-03 Panthera leo 29812 2022-01-25 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29812 100.00
OEAV13540128 hCoV-19/lion/USA/TX-22-002383-002/2022 EPI_ISL_10656100 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-14 Panthera leo 29792 2022-03-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Texas Veterinary Medical Diagnostic Laboratory Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Thanh T. Chinh, Tod P. Stuber, Mia Torchetti, Kristina Lantz Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29792 100.00
OEAV13540254 hCoV-19/tiger/USA/FL-22-000348-001/2022 EPI_ISL_10656098 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-02 Panthera tigris 29827 2022-03-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Florida Department of Agriculture and Consumer Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Thanh T. Chinh, Tod P. Stuber, Mia Torchetti, Kristina Lantz Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29827 100.00
OEAV13540255 hCoV-19/tiger/USA/FL-22-000351-001/2022 EPI_ISL_10656099 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-03 Panthera tigris 29847 2022-03-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Florida Department of Agriculture and Consumer Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Thanh T. Chinh, Tod P. Stuber, Mia Torchetti, Kristina Lantz Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29847 100.00
OEAV18280930 hCoV-19/lion/Colombia/ATL-G-USB_024/2021 EPI_ISL_14505769 RNA virus Severe acute respiratory syndrome coronavirus 2 Colombia 2021-10-19 Panthera leo 29770 2022-08-17 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Fundación Botánica y Zoológica de Barranquilla Yesit Bello-Lemus, Henrique G. Riva, Ibeth Luna-Rodriguez, Leonardo Arrieta-Rangel, Martha Guerra-Simanca, Juvenal Yosa-Reyes, Antonio Acosta-Hoyos Laboratorio de Virología - Universidad Simón Bolívar 28987 97.37
OEAV19074594 hCoV-19/snowleopard/USA/SD-21-030290-001/2021 EPI_ISL_15141949 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-10-07 Panthera uncia 29712 2022-09-27 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman National Veterinary Services Laboratories - USDA Diagnostic Virology Laboratory 27402 92.23
OEAV22295930 hCoV-19/tiger/England/APHA-M12-21-01/2021 EPI_ISL_18917581 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2021-12-03 Panthera tigris altaica 29854 2024-02-21 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Animal and Plant Health Agency (APHA) Virology Department Amanda Seekings, Rebecca Shipley, Alexander Byrne, Shweta Shukla, Megan Golding, Joan Amaya-Cuesta, Hooman Goharriz, Ana Gómez Vitores, Fabian Lean, Joe James, Alejandro Núñez, Alistair Breed, Andrew Frost, Jörg Balzer, Ian Brown, Sharon Brookes, Lorraine McElhinney. Animal and Plant Health Agency (APHA) Virology Department 29854 100.00
OEAV22323588 hCoV-19/tiger/England/M12-01/2021 EPI_ISL_18943726 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2021-12-03 Panthera tigris altaica 29854 2024-02-21 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Animal and Plant Health Agency (APHA) Virology Department Amanda Seekings, Rebecca Shipley, Alexander Byrne, Shweta Shukla, Megan Golding, Joan Amaya-Cuesta, Hooman Goharriz, Ana Gómez Vitores, Fabian Lean, Joe James, Alejandro Núñez, Alistair Breed, Andrew Frost, Jörg Balzer, Ian Brown, Sharon Brookes, Lorraine McElhinney. Animal and Plant Health Agency (APHA) Virology Department 29854 100.00
OEAV22323589 hCoV-19/tiger/England/M12-05/2021 EPI_ISL_18943727 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2021-12-09 Panthera tigris altaica 29850 2024-02-21 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Animal and Plant Health Agency (APHA) Virology Department Amanda Seekings, Rebecca Shipley, Alexander Byrne, Shweta Shukla, Megan Golding, Joan Amaya-Cuesta, Hooman Goharriz, Ana Gómez Vitores, Fabian Lean, Joe James, Alejandro Núñez, Alistair Breed, Andrew Frost, Jörg Balzer, Ian Brown, Sharon Brookes, Lorraine McElhinney. Animal and Plant Health Agency (APHA) Virology Department 28959 97.02
OEAV22323590 hCoV-19/tiger/England/M12-07/2021 EPI_ISL_18943728 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2021-12-09 Panthera tigris altaica 29851 2024-02-21 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Animal and Plant Health Agency (APHA) Virology Department Amanda Seekings, Rebecca Shipley, Alexander Byrne, Shweta Shukla, Megan Golding, Joan Amaya-Cuesta, Hooman Goharriz, Ana Gómez Vitores, Fabian Lean, Joe James, Alejandro Núñez, Alistair Breed, Andrew Frost, Jörg Balzer, Ian Brown, Sharon Brookes, Lorraine McElhinney. Animal and Plant Health Agency (APHA) Virology Department 29653 99.34
OEAV22428304 hCoV-19/Lion/Japan/Lion1/2023 EPI_ISL_19084637 RNA virus Severe acute respiratory syndrome coronavirus 2 Japan 2023-01-12 Panthera leo 29723 2024-04-30 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Department of Veterinary Science, National Institute of Infectious Diseases Yudai Kuroda, Tsukasa Yamamoto, Ken Maeda Department of Veterinary Science, National Institute of Infectious Diseases 29723 100.00
OEAV22428305 hCoV-19/Lion/Japan/Lion2-1/2023 EPI_ISL_19084638 RNA virus Severe acute respiratory syndrome coronavirus 2 Japan 2023-01-09 Panthera leo 29723 2024-04-30 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Department of Veterinary Science, National Institute of Infectious Diseases Yudai Kuroda, Tsukasa Yamamoto, Ken Maeda Department of Veterinary Science, National Institute of Infectious Diseases 29723 100.00
OEAV22428306 hCoV-19/Lion/Japan/Lion2-2/2023 EPI_ISL_19084639 RNA virus Severe acute respiratory syndrome coronavirus 2 Japan 2023-01-09 Panthera leo 29723 2024-04-30 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Department of Veterinary Science, National Institute of Infectious Diseases Yudai Kuroda, Tsukasa Yamamoto, Ken Maeda Department of Veterinary Science, National Institute of Infectious Diseases 29723 100.00
OEAV22460090 hCoV-19/tiger/UnitedKingdom/APHAM-122101/2021 EPI_ISL_19092549 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2021-12-03 Panthera tigris altaica 29854 2024-03-22 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Virology, Animal and Plant Health Agency Seekings, A.H., Shipley, R., Byrne, A.M.P., Shukla, S., Golding, M., Amaya Cuesta, J., Goharriz, H., Gomez Vitores, A., Lean, F.Z.X., James, J., Nunez, A., Breed, A., Frost, A., Balzer, J., Brown, I.H., Brookes, S.M., McElhinney, L.M., Seekings, A.H., Shipley, R., Byrne, A.M.P., Shukla, S., Golding, M., Amaya Cuesta, J., Goharriz, H., Gomez Vitores, A., Lean, F.Z.X., James, J., Nunez, A., Breed, A., Frost, A., Balzer, J., Brown, I.H., Brookes, S.M., McElhinney, L.M. Virology, Animal and Plant Health Agency 29854 100.00
OEAV22460091 hCoV-19/tiger/UnitedKingdom/APHAM-122105/2021 EPI_ISL_19092551 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2021-12-09 Panthera tigris altaica 29850 2024-03-22 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Virology, Animal and Plant Health Agency Seekings, A.H., Shipley, R., Byrne, A.M.P., Shukla, S., Golding, M., Amaya Cuesta, J., Goharriz, H., Gomez Vitores, A., Lean, F.Z.X., James, J., Nunez, A., Breed, A., Frost, A., Balzer, J., Brown, I.H., Brookes, S.M., McElhinney, L.M., Seekings, A.H., Shipley, R., Byrne, A.M.P., Shukla, S., Golding, M., Amaya Cuesta, J., Goharriz, H., Gomez Vitores, A., Lean, F.Z.X., James, J., Nunez, A., Breed, A., Frost, A., Balzer, J., Brown, I.H., Brookes, S.M., McElhinney, L.M. Virology, Animal and Plant Health Agency 28959 97.02
OEAV22460092 hCoV-19/tiger/UnitedKingdom/APHAM-122107/2021 EPI_ISL_19092554 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2021-12-09 Panthera tigris altaica 29851 2024-03-22 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Virology, Animal and Plant Health Agency Seekings, A.H., Shipley, R., Byrne, A.M.P., Shukla, S., Golding, M., Amaya Cuesta, J., Goharriz, H., Gomez Vitores, A., Lean, F.Z.X., James, J., Nunez, A., Breed, A., Frost, A., Balzer, J., Brown, I.H., Brookes, S.M., McElhinney, L.M., Seekings, A.H., Shipley, R., Byrne, A.M.P., Shukla, S., Golding, M., Amaya Cuesta, J., Goharriz, H., Gomez Vitores, A., Lean, F.Z.X., James, J., Nunez, A., Breed, A., Frost, A., Balzer, J., Brown, I.H., Brookes, S.M., McElhinney, L.M. Virology, Animal and Plant Health Agency 29653 99.34
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